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[error] No input FASTQs were found with the requested sample indices.
WebHere are a few common causes with ways you might correct them: Specified the wrong path to the FASTQ files. Please specify the path all the way to the directory containing the correct FASTQ files. Also note that extra directories and file can affect FASTQ parsing, so removing non-FASTQ files from the FASTQ directory may also resolve issues. Jan 24, 2024 · WebMar 15, 2024 · Dear Cellranger, I am running the following codes to process my fastq data. cellranger count --id=Sample8_GE --transcriptome=refdata-gex-mm10-2024-A fix toothache